Package noduledata.imagej

Class NoduleClump

java.lang.Object

noduledata.imagej.NoduleClump

public class NoduleClump
extends Object

An object of this class represents a nodule clump and the data that separates the nodule into separated nodules via various methods. A supporting class of ColorData.java.

Author:

Brandin Farris

Field Summary

Fields

Modifier and Type	Field	Description
double	area
boolean	hasMixed
int	index
int	numNodules
ij.gui.ShapeRoi	roi

Constructor Summary

Constructors

Constructor	Description
NoduleClump()
NoduleClump(int index, ij.gui.ShapeRoi roi, double area, int numNodules, ij.ImagePlus imp)	constructor

Method Summary

Modifier and Type	Method	Description
int	correctClump(ij.ImagePlus imp)	Prompts the user to correct (or not) the number of nodules within the clump.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

index

public int index

roi

public ij.gui.ShapeRoi roi

area

public double area

numNodules

public int numNodules

hasMixed

public boolean hasMixed

Constructor Details

NoduleClump

public NoduleClump()

NoduleClump

public NoduleClump(int index,
 ij.gui.ShapeRoi roi,
 double area,
 int numNodules,
 ij.ImagePlus imp)

constructor

Parameters:

index - : index in ColorData.rois of the clump

roi - : roi object of the clump

area - : number of pixels in the clump

numNodules - : number of nodules in the clump

imp - : image we're doing analysis on

Method Details

correctClump

public int correctClump(ij.ImagePlus imp)
                 throws IllegalStateException

Prompts the user to correct (or not) the number of nodules within the clump.

Parameters:

imp - : image of roi.

Throws:

IllegalStateException - : if the input received from the user is invalid.